| Mannschaften | Erg. | Zus. | |||
|---|---|---|---|---|---|
| 12.05.2009 36. Spieltag | |||||
| SC Paderborn 07 SV Werder Bremen II |
0:2 | 0 | |||
| SV Stuttgarter Kickers VfR Aalen |
1:4 | 0 | |||
| 13.05.2009 36. Spieltag | |||||
| SpVgg Unterhaching BTSV Eintracht Braunschweig |
2:0 | 0 | |||
| SV Sandhausen SG Dynamo Dresden |
2:2 | 0 | |||
| 12.05.2009 36. Spieltag | |||||
| SSV Jahn Regensburg Wuppertaler SV Borussia |
2:0 | 0 | |||
| FC Erzgebirge Aue 1. FC Union Berlin |
0:1 | 8.800 | |||
| 13.05.2009 36. Spieltag | |||||
| BSV Kickers Emden VfB Stuttgart II |
2:1 | 0 | |||
| FC Rot-Weiß Erfurt Offenbacher FC Kickers |
1:1 | 0 | |||
| Fortuna Düsseldorf FC Carl Zeiss Jena |
1:0 | 0 | |||
| FC Bayern München II SV Wacker Burghausen |
3:1 | 0 | |||
| Pl. | Verein | Sp. | Gew. | Un. | Ver. | Pkt. | Tore | +/- |
|---|---|---|---|---|---|---|---|---|
| 1. | 1. FC Union Berlin | 36 | 22 | 11 | 3 | 77 | 56:19 | 37 |
| 2. | SpVgg Unterhaching | 36 | 19 | 7 | 10 | 64 | 52:41 | 11 |
| 3. | Fortuna Düsseldorf | 36 | 18 | 9 | 9 | 63 | 51:32 | 19 |
| 4. | SC Paderborn 07 | 36 | 18 | 8 | 10 | 62 | 59:38 | 21 |
| 5. | FC Bayern München II | 36 | 14 | 15 | 7 | 57 | 51:35 | 16 |
| 6. | BSV Kickers Emden | 36 | 15 | 10 | 11 | 55 | 42:42 | 0 |
| 7. | Offenbacher FC Kickers | 36 | 12 | 14 | 10 | 50 | 39:35 | 4 |
| 8. | VfB Stuttgart II | 36 | 13 | 9 | 14 | 48 | 58:46 | 12 |
| 9. | SV Sandhausen | 36 | 12 | 12 | 12 | 48 | 53:47 | 6 |
| 10. | FC Rot-Weiß Erfurt | 36 | 13 | 9 | 14 | 48 | 43:45 | -2 |
| 11. | FC Erzgebirge Aue | 36 | 12 | 11 | 13 | 47 | 42:41 | 1 |
| 12. | SG Dynamo Dresden | 36 | 12 | 10 | 14 | 46 | 42:44 | -2 |
| 13. | BTSV Eintracht Braunschweig | 36 | 12 | 8 | 16 | 44 | 43:46 | -3 |
| 14. | SSV Jahn Regensburg | 36 | 10 | 12 | 14 | 42 | 34:48 | -14 |
| 15. | Wuppertaler SV Borussia | 36 | 10 | 11 | 15 | 41 | 34:43 | -9 |
| 16. | VfR Aalen | 36 | 8 | 15 | 13 | 39 | 36:56 | -20 |
| 17. | SV Werder Bremen II | 36 | 9 | 10 | 17 | 37 | 47:57 | -10 |
| 18. | FC Carl Zeiss Jena | 36 | 9 | 10 | 17 | 37 | 35:54 | -19 |
| 19. | SV Wacker Burghausen | 36 | 9 | 10 | 17 | 37 | 38:58 | -20 |
| 20. | SV Stuttgarter Kickers | 36 | 7 | 11 | 18 | 29 | 38:66 | -28 |